Re: build problem with intel compiler

From: Mary Haley <haley_at_nyahnyahspammersnyahnyah>
Date: Wed Mar 21 2012 - 21:46:14 MDT

It looks like NCL wasn't built with the same options as PyNGL.

How did you build NCL? What options did you use?


On Mar 19, 2012, at 5:39 PM, Andre R. Erler wrote:

> Hi All,
> I've posted to this list earlier. I made some progress building PyNio and now
> I need to build PyNGL itself. Unfortunately I'm getting a rather strange error
> message.
> I'm running a 64bit kubuntu 11.04 system and I built NCARG/NCL and all the
> dependencies as well as PyNIO with the Intel Compiler Suite
> (composerxe-2011.4.191). I don't have HDF4 or libcairo and built NCARG and
> PyNGL without these options.
> The error is this:
> /usr/bin/ld: /usr/local/ncarg/lib/libnfpfort.a(dmapgci.o): relocation
> R_X86_64_32 against `.rodata.str1.4' can not be used when making a shared
> object; recompile with -fPIC
> /usr/local/ncarg/lib/libnfpfort.a: could not read symbols: Bad value
> collect2: ld returned 1 exit status
> error: Command "gcc -pthread -shared -g -L/usr/local/lib -L/usr/lib32/ -O2 -
> I/usr/local/include -I/usr/include/xorg/ build/temp.linux-x86_64-2.7/Helper.o
> build/temp.linux-x86_64-2.7/hlu_wrap.o build/temp.linux-x86_64-2.7/gsun.o -
> L/usr/local/ncarg/lib -L/opt/intel/composerxe-2011.4.191/compiler/lib/intel64/
> -L/opt/EPD/epd-7.1-1-rh5-x86_64/lib -lnfpfort -lhlu -lncarg -lncarg_gks -
> lncarg_c -lngmath -lX11 -lm -lifcore -lirc -lifport -lpython2.7 -o
> build/lib.linux-x86_64-2.7/PyNGL/" failed with exit status 1
> I have no idea why this happens or how to fix it. I included -fPIC in all
> compiler flags and I'm also wondering why gcc does the linking even though all
> the compilation is done with icc/ifort.
> I've attached a script with my environment variables and the build-log.
> Any help would be greatly appreciated.
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Received on Wed Mar 21 21:46:21 2012

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